Insertion junction: CLIP2.023037_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.023037
Chromosome:chromosome 12
Location:5853806
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533351 CLPB5 (1 of 3) K03695 - ATP-dependent Clp protease ATP-binding subunit ClpB (clpB); ClpB chaperone, Hsp100 family intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGCGCAACCCTAGCTCTCCCGCGTACGCGCGCCCTGCGCCCGGCCCT
Internal bar code:GTGGTGGGAAAGCTCTACTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:667
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGTTTGTGGTGAGGAAC
Suggested primer 2:CTTCAACTGGGTCGCTCTGT