Insertion junction: CLIP2.023040_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.023040
Chromosome:chromosome 17
Location:2370611
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g714150 KUP1 (1 of 5) K03549 - KUP system potassium uptake protein (kup); Potassium ion uptake transporter intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAAGTACAGGGCGACGGAAATCATTGGCTGCTGTGCAGGTGGCAGGGC
Internal bar code:CCTGGGTTTGATAGATCCCACC

Confirmation - LEAP-Seq

LEAP-Seq distance:611
LEAP-Seq percent confirming:35.7143
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CGACGTGTCTGTGTTCCTGA
Suggested primer 2:CGTCCTCGTCCTCTGAATCG