Insertion junction: CLIP2.023041_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.023041
Chromosome:chromosome 12
Location:3047219
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g501450 SDIR1 RING finger-type E3 ligase, SDIR1 ortholog; (1 of 1) PTHR14155//PTHR14155:SF163 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCGCCGCCCCTGTCGGATGAAGACATCGCCGCTCTGCCCAGCTACCCC
Internal bar code:TAGATGTTTAGTTCATGTGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3101
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:87
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCACAGCCTGCCCTAAAT
Suggested primer 2:CTGCGCGCACTGAATATCAC