Insertion junction: CLIP2.023047_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.023047
Chromosome:chromosome 12
Location:4125375
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g517100 (1 of 2) 5.5.1.6 - Chalcone isomerase / Chalcone--flavanone isomerase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTGAGCGAACGTATGGAGCGACTGGCCAGCACAGCAGCCGCACTCGAA
Internal bar code:GTTGAATGGAGGGATAGCGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2115
LEAP-Seq percent confirming:88.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGGCTTGATGGACTGTGG
Suggested primer 2:CTGCACCACTCTCGCTGTTA