Insertion junction: CLIP2.023047_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.023047
Chromosome:chromosome 12
Location:4125386
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g517100 (1 of 2) 5.5.1.6 - Chalcone isomerase / Chalcone--flavanone isomerase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCACTGCTCTCTCAGCTCTCGAAAGGTAAACGCGCGCTTTGCTACCGT
Internal bar code:GTTGAATGGAGGGATAGCGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4420
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCACCACTCTCGCTGTTA
Suggested primer 2:ATGGGCTTGATGGACTGTGG