Insertion junction: CLIP2.023057_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.023057
Chromosome:chromosome 14
Location:611084
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g611950 PPR-superfamily protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATCTCGATCATGTTCATCACGCGGCTGTGTTGGAGAGCACAAGGAACA
Internal bar code:AATTGTACTTGCATCGTAGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1149
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TCAAATGCCTCGGTACCCAC
Suggested primer 2:AACGTTGCACCGACATCTCT