Insertion junction: CLIP2.023067_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.023067
Chromosome:chromosome 10
Location:724686
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g422450 GGT1,PGSIP6 (1 of 1) PTHR11183//PTHR11183:SF39 - GLYCOGENIN // PROTEIN GYG-1, ISOFORM A; Plant glycogenin-like starch initiation protein 6 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACCAGCTCTCCTCCCGCCCCATTCATCCCGACTCCTTCTCTCCTATCC
Internal bar code:AAGGCGCCTTGGCAGGTGGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:888
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTTGGTGTACACGTAGGC
Suggested primer 2:GCTCTTTGTGGGGCCATAGT