Insertion junction: CLIP2.023070_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.023070
Chromosome:chromosome 11
Location:2395790
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095125 (1 of 1) IPR000104//IPR000408//IPR009091 - Antifreeze protein, type I // Regulator of chromosome condensation, RCC1 // Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGCGTATTGCTGGCCCAGCGCTCCAGACCTCAGCACATCAGCACACGC
Internal bar code:TGTGATTTTATCTGCTTTGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:680
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGCTGGTAGAAGTGTGGT
Suggested primer 2:TGCCCCCAAGTTTTATCGCT