Insertion junction: CLIP2.023076_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.023076
Chromosome:chromosome 3
Location:5717140
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g187000 (1 of 1) PF12325//PF12329 - TATA element modulatory factor 1 TATA binding (TMF_TATA_bd) // TATA element modulatory factor 1 DNA binding (TMF_DNA_bd) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGCAGCCGGCTGGGGAACGGTGCGGCATGATGACCGTGTGCGGCAGG
Internal bar code:TTATTATGCTTACAAGTCTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1690
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CATGGCAAGAATGGTAGCGC
Suggested primer 2:ACTGGTTGTCCGGGCAATAG