Insertion junction: CLIP2.023106_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.023106
Chromosome:chromosome 3
Location:5793207
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g187700 HEL19 (1 of 1) PTHR24031//PTHR24031:SF252 - RNA HELICASE // SUBFAMILY NOT NAMED; DEAD/DEAH box helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACAGCGGCCAAAGCACCGGCTCAAGCTATCCCGACTTCCCAAACCCCC
Internal bar code:TCGCACCTCTGTGTATCGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:142
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCAGGTCGTCATGAGAGG
Suggested primer 2:AAAGGAGAATGCTGACCGGG