Insertion junction: CLIP2.023106_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.023106
Chromosome:chromosome 3
Location:5793208
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g187700 HEL19 (1 of 1) PTHR24031//PTHR24031:SF252 - RNA HELICASE // SUBFAMILY NOT NAMED; DEAD/DEAH box helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGACTTGTGGAGTGGGCAACGCAGGGACCCCGCCCGGCAGTCCTTTCCT
Internal bar code:TCGCACCTCTGTGTATCGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1311
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGGAGAATGCTGACCGGG
Suggested primer 2:CGTCAGGTCGTCATGAGAGG