Insertion junction: CLIP2.023138_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.023138
Chromosome:chromosome 1
Location:7162819
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g051300 (1 of 8) PTHR11339//PTHR11339:SF290 - EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED // PROTEIN T26A8.1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACCTCATGCCCCTGTCCCTCCCAGGCCCACCCGCCTCCTCCTCGCCCC
Internal bar code:AAATGATATGCAACTAATTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2128
LEAP-Seq percent confirming:34.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTCCAAGCCCAACTACTT
Suggested primer 2:CAACTTCTCGGTGTGCAAGC