Insertion junction: CLIP2.023142_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.023142
Chromosome:chromosome 2
Location:3996671
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g102750 (1 of 2) PTHR31646:SF1 - ALPHA-1,2-MANNOSYLTRANSFERASE MNN2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGGGATGGCAGCGATACGCAGCAGTGTCGACCCTGCCCCTTGTGCTTT
Internal bar code:AGCTCACTAACGATTTTCCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1363
LEAP-Seq percent confirming:85.9649
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTTGCGTACGGTATGCTG
Suggested primer 2:CCGCACACACCAGTAGAAGT