Insertion junction: CLIP2.023144_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.023144
Chromosome:chromosome 12
Location:6287205
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g536600 FAP78 Flagellar Associated Protein 78; (1 of 7) PTHR11584:SF381 - PROTEIN PQN-80, ISOFORM B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCAACATGGCGGGCAGCCAGGACTCGCCCACCGACACAAGCGTCTCCA
Internal bar code:GAGCATTGTTATTCAATCTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2027
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGGGGTTGAAAATGGATG
Suggested primer 2:CCACTACACCCAGCCCATTT