Insertion junction: CLIP2.023148_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.023148
Chromosome:chromosome 11
Location:3120345
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g475450 (1 of 1) K11863 - Ataxin-3 (ATXN3, MJD) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATTGTATTTGCGGCTTTGTAACAGGACCACAGCGCGTCCACCTGCTCT
Internal bar code:CGATTGCTAGTCCGTGAGTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2344
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CTGAATGCAAGCTCGATGGC
Suggested primer 2:CGCGGCATTCTCATTCTTGG