Insertion junction: CLIP2.023163_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.023163
Chromosome:chromosome 8
Location:3874542
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g381800 (1 of 2) 5.3.3.2 - Isopentenyl-diphosphate Delta-isomerase / Methylbutenylpyrophosphate isomerase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGTCAGGGCACATGGCACATGACACAACCCAAGTCCCAAACCCCGCCA
Internal bar code:CGGTTGACTGTTACGATGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2819
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CACCGTGTATCGCTAGGACC
Suggested primer 2:ACCATGCCATTGGAGATGCA