Insertion junction: CLIP2.023164_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.023164
Chromosome:chromosome 10
Location:3926622
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g446650 HEL46,MER (1 of 1) K15271 - ATP-dependent DNA helicase HFM1/MER3 [EC:3.6.4.12] (HFM1, MER3); conserved protein with DEAD/DEAH box helicase domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGGAACTCTGCTGGGTTTGTCTGTTCTGGAGCTGAGCGGTGACGCGG
Internal bar code:TTAACCTAAGATAATTTAACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2367
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTACGCATTGCCTCAACT
Suggested primer 2:TAAGGCATGGCGCAGTTACA