Insertion junction: CLIP2.023170_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.023170
Chromosome:chromosome 3
Location:6692267
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g195600 (1 of 1) 3.2.1.28 - Alpha,alpha-trehalase / Trehalase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGGGCCACGCGGACGGGTGATGGTTCAGCGGCGCGCGATAATGGGCTT
Internal bar code:ATTTGCGAGCTACCTGTTTCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1973
LEAP-Seq percent confirming:98.1481
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTGTGGTTGTTGCTGAC
Suggested primer 2:TCAACAGCCAGGCTACATGG