Insertion junction: CLIP2.023179_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.023179
Chromosome:chromosome 2
Location:2354805
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g090850 CLPB3 (1 of 1) PTHR11638//PTHR11638:SF121 - ATP-DEPENDENT CLP PROTEASE // CHAPERONE PROTEIN CLPB3, CHLOROPLASTIC; ClpB chaperone, Hsp100 family intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAATGAATATAGCCCCGCACCCAGATCGGCAATTGAGTCTGGTCGAGT
Internal bar code:CGGATTTCAATAGCGGGCCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:657
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TTACATGGGGGAGAGGGAGG
Suggested primer 2:GATAAGATCCTTCCGCGCCA