Insertion junction: CLIP2.023194_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.023194
Chromosome:chromosome 11
Location:3874514
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g479600 MHX1,CAX6 (1 of 1) K05849 - solute carrier family 8 (sodium/calcium exchanger) (SLC8A, NCX); putative Ca2+/Na+ exchanger CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATACCCAAAACTCAGACGTAGTGTGCACGTCCGACATCCTGTTGCCAGG
Internal bar code:TCTATCTGGCACTGCAACTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1426
LEAP-Seq percent confirming:96.875
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GTCACGCACCAGTTCCAAAC
Suggested primer 2:GATTGTGCATGCGATGGGAC