Insertion junction: CLIP2.023197_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.023197
Chromosome:chromosome 1
Location:567510
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g003475 (1 of 2) 3.4.24.35 - Gelatinase B / Type V collagenase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTGGCTGACGCGGTGGAGTCGTTCATCTACCTGTACGCGCCGGCCGT
Internal bar code:GATATCGCGTAAGCCTGACGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1047
LEAP-Seq percent confirming:95.1219
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GTACACACACGCACACACAC
Suggested primer 2:GTCCTGTTGGGTGCGTTTTC