Insertion junction: CLIP2.023208_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.023208
Chromosome:chromosome 13
Location:4134244
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g591150 HTA38,HTA22 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGTCGCGCGCGGCGTTGCCGGCCAGCTCCAGCACCTCAGCGGTCAGGT
Internal bar code:GGGGGTTGTTGCGGATATGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3063
LEAP-Seq percent confirming:92.4528
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTTGGCAGCCTTCTTAGC
Suggested primer 2:CCTGTTGACCCCCTTCTTCC