Insertion junction: CLIP2.023209_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.023209
Chromosome:chromosome 11
Location:1836747
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467450 SOM3 S-adenosyl-L-methionine-dependent O-methyltransferase; (1 of 4) PTHR13600//PTHR13600:SF12 - LEUCINE CARBOXYL METHYLTRANSFERASE // LEUCINE CARBOXYL METHYLTRANSFERASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTGGGGACAACGCCGGCAATGCGAATCCTGGGGCTTGGGGAATAACCC
Internal bar code:TGTCGTGTAATAGCCACTTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:172
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGCTGTTGCTGTTGCTGG
Suggested primer 2:AGGTGTGTGTGTGTGTGTGT