Insertion junction: CLIP2.023210_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.023210
Chromosome:chromosome 6
Location:3848514
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278181 (1 of 4) IPR000104//IPR001471//IPR016177 - Antifreeze protein, type I // AP2/ERF domain // DNA-binding domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTTGTTGACCGCCTGACGTCTTTTTCGTGCCACAGCCGCAGGACCCTG
Internal bar code:ACCAGGCTTATCTGTGAGGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3351
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TCCAGGGATTCATGAACGCC
Suggested primer 2:GTAGGAGAGTCCACCGGAGT