Insertion junction: CLIP2.023215_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.023215
Chromosome:chromosome 3
Location:2641027
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g160600 (1 of 1) IPR000104//IPR000679//IPR013088 - Antifreeze protein, type I // Zinc finger, GATA-type // Zinc finger, NHR/GATA-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGCGGCCGATACTCCTGCCGCTGCTGGTGCGCCAGTGGTCGCGCCAT
Internal bar code:CGGAGCGACGTCTTGGCACGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4448
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CACACTTTGGTCATGGTGCG
Suggested primer 2:GAGGGCAGCAGGATGAAGG