Insertion junction: CLIP2.023218_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.023218
Chromosome:chromosome 12
Location:3330270
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g498650 ALK3 (1 of 9) IPR000719//IPR002290//IPR011009//IPR020635//IPR027916 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain // Protein kinase-like domain, Apicomplexa; Aurora-like kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCAGCACGCTGCCGCCGACGGCTGCCCGGCGACCATGACTGATGCCC
Internal bar code:CTTGTCATGGATACGTTTCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3268
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GACACACCGCCTTGTAGACA
Suggested primer 2:TCGACCGATAATGGAGCTGC