Insertion junction: CLIP2.023221_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.023221
Chromosome:chromosome 6
Location:1190937
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g258300 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCAATGGCCCACCTCCACGAGCCGCCGCGTCCAGTGTGGCCGCCATG
Internal bar code:CCTTGTACGCCCTCATAATACG

Confirmation - LEAP-Seq

LEAP-Seq distance:2266
LEAP-Seq percent confirming:45.4545
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TGCATAGGAGGCGATCGAAC
Suggested primer 2:GCAGATCTAGCCGAGGAACC