Insertion junction: CLIP2.023225_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.023225
Chromosome:chromosome 1
Location:866374
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g004900 Similar to Putatative Protease/Amidase; (1 of 1) PTHR11019//PTHR11019:SF1//PTHR11019:SF97 - THIJ/PFPI // SUBFAMILY NOT NAMED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCCACCTGGGGGCGAGGTGAGCAAGCGGGCGGGGTGGTGGGACAAGCT
Internal bar code:ATTTCTTTAGGGCAAGTCATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4875
LEAP-Seq percent confirming:82.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:ATTCTGCTGCAGTCCCAGTC
Suggested primer 2:CGAGCGGCATCATCAGTAGT