Insertion junction: CLIP2.023226_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.023226
Chromosome:chromosome 13
Location:2246830
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g578451 TSL1 (1 of 2) 6.1.1.4 - Leucine--tRNA ligase / Leucyl-tRNA synthetase; Leucyl-tRNA synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCACTGCGCTGCAAGCCACGTGCCGTCACCCCGCTCCTGCACCCACCC
Internal bar code:ATTGTTAATGGTGCTCCAAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:132
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGTGTGTGTGTGTGTGT
Suggested primer 2:TGTTGACCCAGTCCGTGATG