Insertion junction: CLIP2.023240_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.023240
Chromosome:chromosome 17
Location:4659434
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g732566 (1 of 31) IPR016187 - C-type lectin fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCATGAAGGGAAAAAGCAGTGACCCGGCCAGGGGTTCCACCCGGCCAGG
Internal bar code:ATGGGGCTATACGGTCTGGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2541
LEAP-Seq percent confirming:97.561
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCCGTACCTCGCCATAC
Suggested primer 2:AAAGTGCAGGGATGCGATGA