Insertion junction: CLIP2.023248_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.023248
Chromosome:chromosome 3
Location:5988561
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g189450 (1 of 2) PTHR22769//PTHR22769:SF33 - MUTT/NUDIX HYDROLASE // NUCLEOSIDE DIPHOSPHATE-LINKED MOIETY X MOTIF 17 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTATCCCCGCCCCGCCGTGACGGTGGACGCGGCCATTGTGGCCAGGCC
Internal bar code:TGCCATATTAACCTTCCCTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3275
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CGCATAAGCAACGGTGATGG
Suggested primer 2:ACAGGAAACGGTGATGTCCC