Insertion junction: CLIP2.023249_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.023249
Chromosome:chromosome 2
Location:5079329
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g111300 (1 of 5) PF13391 - HNH endonuclease (HNH_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACATACGATAATACCCCGGTCTACCTGTACTGACGTATTAATGAGCCAG
Internal bar code:ACGGAAGTGGGGTATAACACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:5012
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCGGATGATCACGACACG
Suggested primer 2:CGTGTGGAAGAGCAGTTCCT