Insertion junction: CLIP2.023256_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.023256
Chromosome:chromosome 3
Location:688202
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145807 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGCGCTGGGCTGCTGTCCGCTGGAGACGCTGCAGGCCGTGCATGGTCA
Internal bar code:GGGCTGAAAGTACCCAATATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2581
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CATGGCATCCCACTCTTCCA
Suggested primer 2:CTGCCTGGTGTGTTTCGTTG