Insertion junction: CLIP2.023265_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.023265
Chromosome:chromosome 17
Location:1834717
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g709400 (1 of 1) PTHR12894//PTHR12894:SF17 - CNH DOMAIN CONTAINING // TRANSFORMING GROWTH FACTOR-BETA RECEPTOR-ASSOCIATED PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGGCGCTTGCACGCCGATCCCCGCGGGCACCGGTTCATTGTGCCCGAC
Internal bar code:TTGGGTTACGAATGGTCGTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3398
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCTCCACGCCAACATCAG
Suggested primer 2:GCAAATTAAGCCCGGCTACG