Insertion junction: CLIP2.023294_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.023294
Chromosome:chromosome 10
Location:366668
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g420450 (1 of 2) PTHR18841:SF0 - PROTEIN C08G5.3, ISOFORM A-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACGCGAGTGCATGCTGGCCGGTACAGAAACAAGGCAGCAGGGGCGGGC
Internal bar code:TAGCAGATGAACAAAGGATCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:217
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ACAACACGGTGGTCAGATCC
Suggested primer 2:CTAGCATTTCGCCGCTTGAC