Insertion junction: CLIP2.023294_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.023294
Chromosome:chromosome 10
Location:370529
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g420450 (1 of 2) PTHR18841:SF0 - PROTEIN C08G5.3, ISOFORM A-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTCCGGAACATGCACACGCACACACGCACGCGCCCAAAGGTCATGAGC
Internal bar code:ACTACGACTCCAATTAATAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:234
LEAP-Seq percent confirming:0.833333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:119
LEAP-Seq n unique pos:120

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGCATTTCGCCGCTTGAC
Suggested primer 2:ACAACACGGTGGTCAGATCC