Insertion junction: CLIP2.023295_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.023295
Chromosome:chromosome 12
Location:4660615
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g522300 (1 of 1) IPR001611//IPR002048//IPR003590//IPR008907//IPR011992 - Leucine-rich repeat // EF-hand domain // Leucine-rich repeat, ribonuclease inhibitor subtype // P25-alpha // EF-hand domain pair CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATAGGTAGCACCGCGCATAACGAGATTACGCTGCCGTCCGGCAACGTCT
Internal bar code:ATTTTGTAACCGGAGGAGCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1006
LEAP-Seq percent confirming:84.8485
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TTAGTCTTGCCTGCTCCTGC
Suggested primer 2:AGCAGGCTGTTCATGACCTC