Insertion junction: CLIP2.023309_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.023309
Chromosome:chromosome 16
Location:2212360
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g658200 (1 of 2) IPR003594//IPR024975 - Histidine kinase-like ATPase, C-terminal domain // Domain of unknown function DUF3883 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATTCACGCACCTGGCTGCGGGTGTGGCCGCCGCCTCCGCCGCCTCCACC
Internal bar code:GCTGGTGGAGATTGGTTGTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:343
LEAP-Seq percent confirming:43.75
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTGCTCCTTACTCCTCCT
Suggested primer 2:AGCAGCGCAAGTAAGTAGCA