Insertion junction: CLIP2.023312_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.023312
Chromosome:chromosome 3
Location:5273631
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g182400 (1 of 7) K18932 - palmitoyltransferase (ZDHHC) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCTGCCTGGCATCCATCATGTCTCCACCCTACACCCTTTGCTCCTTAG
Internal bar code:AATGTGGTTACTGCTCGTACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4305
LEAP-Seq percent confirming:92.0
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAGGACTCATCGCAATTG
Suggested primer 2:GGTGGGGGTGTGGTCATTAG