Insertion junction: CLIP2.023318_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.023318
Chromosome:chromosome 1
Location:3183570
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g020264 VPS30,ATG6,APG6 (1 of 1) K08334 - beclin 1 (BECN1, VPS30, ATG6); Autophagy-related protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGTTGATGGGTACAAGACGAGGGCAGCGCGTCGTACGCGGAGTGGTG
Internal bar code:GGGTACCAGCTCTGCGGTATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:279
LEAP-Seq percent confirming:61.5385
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACACACATGCACATGC
Suggested primer 2:CACCAACCTTTCTTGCTGCC