Insertion junction: CLIP2.023331_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.023331
Chromosome:chromosome 9
Location:4578432
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401367 (1 of 1) PTHR15189:SF7 - BRCA1-A COMPLEX SUBUNIT BRE CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGCGCTGCCATCTCGCGCGCCGCCCACCGCGGGCTCCAGGGGTAGTCG
Internal bar code:TTGGAAATTACAAGTTGGTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:503
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACCCCCAAATAGGCCAT
Suggested primer 2:CTCTTCCTCCTCCTGCTCCT