Insertion junction: CLIP2.023338_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.023338
Chromosome:chromosome 16
Location:3763436
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684861 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCTGAGCGCGATGCATCAGCTTCTTCACAACGAGCGTGGCGGTGGCGC
Internal bar code:ATGTGGCGATAAATATATTCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2520
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCGTCTCCAAAAGCAGT
Suggested primer 2:TTTGGGCTGGGATGTACACC