Insertion junction: CLIP2.023339_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.023339
Chromosome:chromosome 17
Location:2141823
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g712050 (1 of 8) PF01697 - Glycosyltransferase family 92 (Glyco_transf_92) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCAGCTGTTTGGTCCCAGTGGCCACATGCGGCGGCCGCGCGGCAGCA
Internal bar code:TAAGCCAGGGTCGTAGGACAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:976
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TTGACAAAGCCCAGCGGTAT
Suggested primer 2:CTCATTCAACGCTCCTGGGT