Insertion junction: CLIP2.023340_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.023340
Chromosome:chromosome 12
Location:4968467
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g524800 (1 of 4) IPR005819 - Histone H5 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGCCATCGCGGTTCGCCGTTAGCCCGCCTTGCGAGTTACCAATAGGAG
Internal bar code:TTTATCTAACGGAGATCAGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2980
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:88
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAGCCAAGTCCAATGCAA
Suggested primer 2:CGTGTCTGTCTAAGCACGGT