Insertion junction: CLIP2.023340_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.023340
Chromosome:chromosome 12
Location:4968467
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g524800 (1 of 4) IPR005819 - Histone H5 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCTACACCCGAACAGGCCCCCAAGAAGGCTGCCCCAGCGCCTAAGAAG
Internal bar code:TTGGAAACTGTGACATTCTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3623
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:111
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:111

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTCTGTCTAAGCACGGT
Suggested primer 2:GCAAGCCAAGTCCAATGCAA