Insertion junction: CLIP2.023341_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.023341
Chromosome:chromosome 3
Location:3868580
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g170450 (1 of 239) IPR016024 - Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCCAGCCGCTCCCAGCTCACCTCAGCCCACGTCTCGGCGTCGCTGGAT
Internal bar code:TGCCATGTCGGATAATCGGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1210
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CTATGAGATCCGTCGGGTGC
Suggested primer 2:CAAAGCGAGTCATGCGGATG