Insertion junction: CLIP2.023342_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.023342
Chromosome:chromosome 9
Location:2523884
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392850 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTCTCGGCAGGTATCAGCAGCCGCCCGGGCCATGGCGGTTGCAGCCGT
Internal bar code:TACATATATGTAAACCACAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1930
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:GCACTCCCCATGGTTGATGA
Suggested primer 2:CAGTACCTCGACCTCATGCC