Insertion junction: CLIP2.023343_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.023343
Chromosome:chromosome 16
Location:4211467
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g670050 (1 of 1) PTHR10972//PTHR10972:SF69 - OXYSTEROL-BINDING PROTEIN-RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAATTCCGGTTCTCCGGCATCAATTCCCGCGCCATCTCCTCCTGCAGA
Internal bar code:TTCGACTACCGCAAACGTGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4393
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGAAGGAGGTGGTTCCA
Suggested primer 2:CATCGCTGGAGGAGAAGACC