Insertion junction: CLIP2.023356_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.023356
Chromosome:chromosome 2
Location:3101049
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g096100 (1 of 3) PTHR30545 - PROBABLE DNA-BINDING TRANSCRIPTIONAL REGULATOR SFSA intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAAATTGTCGACTGAGCTGGCGCGTGTTGCACGCTGTGTCGATTCAATT
Internal bar code:GCGATGGCCTAAACGGTAGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:816
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGCGATCTCACGGATCTG
Suggested primer 2:CGGTGTTGAGTGCCTTTTGG