Insertion junction: CLIP2.023356_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.023356
Chromosome:chromosome 2
Location:3101049
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g096100 (1 of 3) PTHR30545 - PROBABLE DNA-BINDING TRANSCRIPTIONAL REGULATOR SFSA intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGCGAGGCTGCGACGGCCGGTCAGCTGCCCATCCATGACCAAGGAAA
Internal bar code:GCGATGGCCTAAACGGTAGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:433
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTGTTGAGTGCCTTTTGG
Suggested primer 2:GAGGCGATCTCACGGATCTG